Problem:
You are trying to run mongorestore my-backup, but you see large numbers of warning messages like this one:
- E11000 duplicate key error collection: mydb.mycollection index: _id_ dup key: { : "MyKey" }
Solution:
By default, mongorestore does not overwrite or delete any existing documents. You need to tell it to drop each collection immediately before importing it from the backup:
mongorestore --drop my-backup
Any documents not in the backup will be permanently lost after running this!
Note that this will not drop collections that are not present in the backup.