Bachelor’s Thesis (2015)
Topic: Algorithms for resource-constrained domain-specific knowledge management
GOBI Lab (2014)
Topic: Efficient all-against-all protein similarity matrix computation using OpenCL
Notable reports of two-week projects:
Functional classification, introducing GOText interactive gene ontology search
Note that the original presentation contained showcase images of CPUs, FPGAs and GPUs on slide 5. Because of their unclear license, we didn’t include them here.
Topic: Phylogenomic inference
Topic: Textkompression: Burrows-Wheeler-Kompression (in german)
All data — as well as source code — is available as open data or open source respectively. However, we didn’t have time to properly publish anything yet, so please feel free to contact us to request data and/or source code.
Luckily, anything here (so far) has been made using LaTeX.